Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2432

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2431: 10799 - Hypothetical Protein, at 109919 to 110380 10799 mRNA_2432: 10800 - K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20, at 111348 to 112998 10800 mRNA_2433: 10801 - K10866 RAD50 DNA repair protein RAD50, at 113156 to 118783 10801

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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110,586 + -0.5
110,764 + 1.2
110,933 + -0.3
110,965 - 1.2
110,985 - -0.3
110,994 - 0.3
111,014 + -0.8
111,139 + 0.2
111,148 + -0.2
111,163 - -0.5
111,169 - -0.2
111,169 + -0.1
111,183 + -2.0
111,319 - -1.6
111,324 + -0.9
111,628 - 10800 mRNA_2432 0.17 0.7
111,727 - 10800 mRNA_2432 0.23 0.8
111,921 + 10800 mRNA_2432 0.35 -0.3
112,029 + 10800 mRNA_2432 0.41 0.1
112,458 - 10800 mRNA_2432 0.67 -0.0
112,605 + 10800 mRNA_2432 0.76 -1.0
113,013 - 0.5
113,893 - 10801 mRNA_2433 0.13 -0.6