Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2328

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2327: 10695 - Hypothetical Protein, at 616454 to 617684 10695 mRNA_2328: 10696 - KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs, at 617793 to 619842 10696

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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616,936 - 10695 mRNA_2327 0.39 -2.8
617,384 - 10695 mRNA_2327 0.76 -0.5
617,541 + 10695 mRNA_2327 0.88 -0.7
617,660 - 0.4
617,664 + -0.7
617,816 + -1.2
617,983 + 0.7
617,986 + 1.1
618,115 + 10696 mRNA_2328 0.16 1.7
618,138 - 10696 mRNA_2328 0.17 -0.1
618,265 - 10696 mRNA_2328 0.23 0.8
618,301 + 10696 mRNA_2328 0.25 0.8
618,401 - 10696 mRNA_2328 0.30 -0.4
618,431 + 10696 mRNA_2328 0.31 0.6
618,449 - 10696 mRNA_2328 0.32 -0.0
618,457 + 10696 mRNA_2328 0.32 0.3
618,508 + 10696 mRNA_2328 0.35 0.7
618,665 - 10696 mRNA_2328 0.43 0.1
618,841 - 10696 mRNA_2328 0.51 0.4
618,959 + 10696 mRNA_2328 0.57 0.0
619,110 + 10696 mRNA_2328 0.64 -0.8
619,189 + 10696 mRNA_2328 0.68 -1.0
619,261 + 10696 mRNA_2328 0.72 -2.0
619,263 + 10696 mRNA_2328 0.72 -0.0
619,296 + 10696 mRNA_2328 0.73 0.7
619,403 - 10696 mRNA_2328 0.79 -0.2
619,603 + 10696 mRNA_2328 0.88 1.9
619,604 - 10696 mRNA_2328 0.88 -0.9
619,690 + -0.6
619,742 + -0.4
619,839 + -0.4
619,999 + -0.2
620,020 + -0.1
620,043 - -0.3
620,114 - -0.8
620,288 - -0.2
620,297 - -0.1
620,619 + -2.3
620,714 - -0.0
620,739 + -2.0