Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2322

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2321: 10689 - K14807 DDX51, DBP6 ATP-dependent RNA helicase DDX51/DBP6, at 604206 to 606574 10689 mRNA_2322: 10690 - Hypothetical Protein, at 606743 to 609720 10690

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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606,669 + -1.0
607,269 + 10690 mRNA_2322 0.18 1.8
607,390 - 10690 mRNA_2322 0.22 -0.4
607,497 - 10690 mRNA_2322 0.25 1.1
607,957 - 10690 mRNA_2322 0.41 -1.1
607,978 + 10690 mRNA_2322 0.41 -0.5
608,215 - 10690 mRNA_2322 0.49 -0.3
608,541 + 10690 mRNA_2322 0.60 -0.4
608,600 - 10690 mRNA_2322 0.62 -2.3
608,660 - 10690 mRNA_2322 0.64 1.7
608,685 - 10690 mRNA_2322 0.65 -1.0
608,997 - 10690 mRNA_2322 0.76 -0.1
609,180 - 10690 mRNA_2322 0.82 0.9
609,309 - 10690 mRNA_2322 0.86 -0.2
609,315 + 10690 mRNA_2322 0.86 -0.2
609,603 - 0.8
609,651 - -0.1
609,729 - 0.9
609,750 + 0.9
609,763 + 1.2
609,763 + -0.5
609,770 + -1.6
609,860 - -1.4
609,874 - 0.9
609,890 - 0.1
609,897 - -0.7
609,899 + -0.0
609,916 + -0.1
609,918 + -0.4
610,012 + -2.5
610,026 + -0.0
610,036 - -1.1
610,042 - 0.5
610,043 + -0.3
610,045 - 1.5
610,045 - 0.2
610,046 + -0.6
610,075 + -0.8
610,087 + -0.3
610,087 - 0.5
610,091 + 0.9
610,095 + 0.7
610,096 + -0.0
610,097 - 0.2
610,100 + 0.9
610,103 - -1.8
610,104 - 0.5
610,106 - -0.3
610,107 + -0.0
610,111 - -0.7
610,114 + 0.3
610,114 - 1.6
610,117 - -0.2
610,120 + -0.2
610,120 - 0.6
610,122 + 0.3
610,126 + -0.5
610,129 - 0.5
610,129 + 0.7
610,129 + -0.4
610,129 + 0.0
610,135 + 0.2
610,141 - -0.2
610,144 + -0.3
610,146 + 1.2
610,149 + 1.1
610,149 + -0.5
610,153 + -0.7
610,154 - -0.3
610,169 - 0.2
610,181 - -0.8
610,182 - 0.1
610,185 - -0.8
610,187 - -0.8
610,188 - 0.3
610,190 - -1.1
610,190 - 0.2
610,194 - 0.4
610,194 + 0.9
610,208 - -0.3
610,216 + -0.2
610,245 - -0.3
610,257 + -0.7
610,301 - -0.4
610,311 + -1.1
610,315 - -0.4
610,323 - 0.7
610,356 + -0.5
610,365 - -0.3
610,385 - -0.7
610,415 - 0.2
610,439 - -0.9
610,460 - -0.3
610,466 - -0.4
610,467 - -0.8
610,477 - -0.5
610,477 - -0.6
610,489 + -0.5
610,506 + 0.3
610,518 - -1.2
610,537 - -0.5
610,558 - 0.2
610,589 - -0.3
610,606 + 1.0
610,610 - -0.7
610,650 + 0.2