Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2213

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2212: 10580 - K04441 P38 p38 MAP kinase, at 371280 to 373458 10580 mRNA_2213: 10581 - Hypothetical Protein, at 373795 to 375886 10581 mRNA_2214: 10582 - K06970 rlmF 23S rRNA (adenine1618-N6)-methyltransferase, at 376563 to 378868 10582

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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373,437 + -0.7
373,484 - -0.1
373,486 - -1.0
373,903 + -0.5
374,188 + 10581 mRNA_2213 0.19 -1.3
374,444 + 10581 mRNA_2213 0.31 -2.2
374,591 - 10581 mRNA_2213 0.38 -0.1
374,617 - 10581 mRNA_2213 0.39 0.1
375,000 + 10581 mRNA_2213 0.58 -0.4
375,378 + 10581 mRNA_2213 0.76 2.0
375,619 - 10581 mRNA_2213 0.87 0.2
375,628 + 10581 mRNA_2213 0.88 0.6
375,768 + 1.2
375,919 + 0.7
375,931 - 0.6
375,932 - -2.3
376,030 - 0.2
376,061 - -0.4
376,069 + 0.2
376,076 - -0.3
376,090 - 1.7
376,095 - 0.0
376,095 + -1.3
376,097 - 0.0
376,098 + -0.2
376,098 + -2.1
376,111 + -0.6
376,113 + 1.6
376,132 + -1.0
376,137 + 0.1
376,154 - 0.0
376,164 + 1.3
376,169 - -0.7
376,174 + -1.4
376,180 - 0.1
376,181 - -0.6
376,186 + 0.5
376,187 - -0.4
376,188 - -0.5
376,189 - -1.2
376,189 - -0.9
376,197 - -1.7
376,200 - -1.7
376,203 + 0.1
376,207 - -1.3
376,212 + 0.4
376,222 + -0.2
376,224 + -0.8
376,229 - 2.3
376,241 - -0.9
376,253 + 0.1
376,266 - -0.5
376,269 + -0.1
376,284 + 0.4
376,299 + 1.2
376,376 - 0.0
376,391 + -0.5
376,540 - -1.6
376,542 + -0.2
376,542 + 0.0
376,545 - -0.7
376,545 + -0.6
376,555 + 0.3