Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2194

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2193: 10561 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 310220 to 312834 10561 mRNA_2194: 10562 - BLAST ER to Golgi transport-related protein, putative [Cryp..., at 313322 to 318107 10562

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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312,469 - 10561 mRNA_2193 0.86 -0.3
312,482 + 10561 mRNA_2193 0.87 -0.7
312,584 - -0.0
312,626 + -0.2
312,631 + -0.8
312,724 - -0.1
312,759 - -0.4
312,787 - -0.0
312,918 + 0.5
312,919 - -0.5
312,919 - -0.2
312,925 + -0.5
312,925 - -0.0
312,933 + 0.1
312,933 + 1.0
312,935 - 1.1
312,936 + -0.2
312,938 - -0.4
312,938 - -0.0
312,940 + -0.4
312,945 + 0.2
312,945 + -0.7
312,945 + -1.0
312,947 + -0.2
312,951 + 0.3
312,955 - -0.2
312,960 - -0.7
312,961 + -0.6
312,961 + -0.5
312,965 + -0.9
312,969 - -0.2
312,971 + -0.0
312,975 - -1.0
312,987 - -0.6
312,988 - -0.3
312,988 + 0.5
312,989 + 1.9
312,996 + 0.6
312,997 - 0.1
313,019 + 0.7
313,099 - -0.6
313,112 + 0.6
313,113 + 0.0
313,122 + -1.4
313,133 + -2.3
313,199 - -0.2
313,201 - 0.3
313,203 + -0.9
313,206 - -1.0
313,349 - -0.7
313,508 - 0.4
313,515 + 0.8
313,516 - -0.8
313,697 + -1.5
314,385 - 10562 mRNA_2194 0.22 -0.9
314,811 - 10562 mRNA_2194 0.31 -0.3
314,849 - 10562 mRNA_2194 0.32 0.0
314,942 - 10562 mRNA_2194 0.34 0.1
315,106 - 10562 mRNA_2194 0.37 -0.8
315,107 + 10562 mRNA_2194 0.37 -0.6
315,116 + 10562 mRNA_2194 0.37 0.6
315,212 - 10562 mRNA_2194 0.39 0.7
315,248 + 10562 mRNA_2194 0.40 -0.4
315,502 - 10562 mRNA_2194 0.46 -0.0
315,511 - 10562 mRNA_2194 0.46 -0.1
315,512 - 10562 mRNA_2194 0.46 0.2
315,569 - 10562 mRNA_2194 0.47 -1.7
316,122 + 10562 mRNA_2194 0.59 -0.1
316,134 + 10562 mRNA_2194 0.59 0.6
316,220 - 10562 mRNA_2194 0.61 0.5
316,533 + 10562 mRNA_2194 0.67 -1.2
316,861 - 10562 mRNA_2194 0.74 -0.1
317,145 - 10562 mRNA_2194 0.80 0.7
317,313 - 10562 mRNA_2194 0.83 -0.5
317,318 - 10562 mRNA_2194 0.83 0.0
317,582 - 10562 mRNA_2194 0.89 0.0
317,854 - -0.2
317,892 - 0.0
317,893 + -1.6
318,046 - 0.9
318,169 + -0.6
318,170 + 0.2
318,202 + 0.2
318,205 + -0.8
318,217 + -0.2
318,250 - 0.9
318,339 + -1.0
318,387 - -0.1
318,387 + 0.6
318,390 + -0.6
318,391 - -2.7
318,446 - -0.8
318,739 - 0.4
318,774 + -0.2
318,978 + 1.1
319,016 + -1.3
319,059 + 0.4
319,069 + 1.1