Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2110

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2109: 10477 - SUPERFAMILY--SSF56112, at 98028 to 98739 10477 mRNA_2110: 10478 - K10277 KDM8, JMJD5 lysine-specific demethylase 8, at 99075 to 100834 10478 mRNA_2111: 10479 - K10575 UBE2G1, UBC7 ubiquitin-conjugating enzyme E2 G1, at 101300 to 102530 10479

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
98,142 - 10477 mRNA_2109 0.16 0.3
98,475 - 10477 mRNA_2109 0.63 -0.5
98,479 - 10477 mRNA_2109 0.63 -1.0
98,479 + 10477 mRNA_2109 0.63 -0.0
98,485 + 10477 mRNA_2109 0.64 -1.3
98,617 - 10477 mRNA_2109 0.83 0.5
98,741 - -0.7
98,814 - -0.5
98,897 - -0.1
98,908 - 0.7
98,911 + -0.8
98,913 + -1.9
99,019 + -0.8
99,023 + -0.3
99,079 - 0.2
99,208 - -0.5
99,231 - 0.9
99,346 - 10478 mRNA_2110 0.15 -0.8
100,055 + 10478 mRNA_2110 0.56 0.9
100,242 + 10478 mRNA_2110 0.66 -0.8
100,366 - 10478 mRNA_2110 0.73 1.2
100,579 - 10478 mRNA_2110 0.85 0.3
100,641 - 10478 mRNA_2110 0.89 0.3
101,102 - -1.0
101,113 - 0.1
101,113 - 0.2
101,138 + -0.6
101,141 - -0.4
101,242 - -1.3
101,262 + -1.1