Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2073

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2072: 10440 - KOG2908 26S proteasome regulatory complex, subunit RPN9/PSMD13, at 7627 to 8732 10440 mRNA_2073: 10441 - Hypothetical Protein, at 8998 to 9576 10441 mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9879 to 11848 10442

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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8,479 + 10440 mRNA_2072 0.77 -0.8
8,538 - 10440 mRNA_2072 0.82 -1.1
8,691 - 0.6
8,715 + -0.1
8,729 + -0.0
8,729 + -0.3
8,816 + -1.1
8,816 + 1.0
8,848 + -0.4
8,864 - 0.1
8,884 - 0.6
8,887 + -1.3
8,889 + -0.9
8,899 - 0.9
8,902 + -0.4
8,904 + -0.3
9,068 - 10441 mRNA_2073 0.12 -1.2
9,479 + 10441 mRNA_2073 0.83 1.0
9,483 - 10441 mRNA_2073 0.84 0.5
9,487 - 10441 mRNA_2073 0.84 1.3
9,623 + 0.9
9,739 - 1.0
9,785 - -0.4
9,788 - -0.2
9,788 - -2.4
9,936 + -1.5
10,090 - 10442 mRNA_2074 0.11 0.3
10,272 + 10442 mRNA_2074 0.20 -1.0