Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2033

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2032: 10400 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 794820 to 796212 10400 mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796887 to 798543 10401 mRNA_2034: 10402 - HMMPfam-Spherulation-specific family 4-PF12138, at 799369 to 800999 10402

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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795,918 + 10400 mRNA_2032 0.79 0.5
796,025 + 10400 mRNA_2032 0.87 0.1
796,091 - 0.7
796,206 - -0.5
796,370 - -2.2
796,529 + 1.1
796,670 + 0.0
796,694 - -0.0
797,120 + 10401 mRNA_2033 0.14 0.0
797,249 + 10401 mRNA_2033 0.22 -0.0
797,481 - 10401 mRNA_2033 0.36 -0.2
797,528 - 10401 mRNA_2033 0.39 -1.6
797,632 + 10401 mRNA_2033 0.45 -3.1
798,125 + 10401 mRNA_2033 0.75 0.5
798,432 + -1.2
798,557 + 0.5
798,558 - -0.4
798,570 - 0.4
798,581 - -2.2
798,683 - 0.3
798,723 + -0.6
798,898 + -0.2
798,929 - -0.6
799,017 + -0.4
799,042 + -0.2
799,180 - 0.1
799,195 + 1.0
799,247 + 0.0
799,274 + 0.0
799,339 + -1.2
799,461 + -0.1
799,493 + -0.7
799,522 - -0.1