Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1992

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687558 to 690393 10359 mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690779 to 693096 10360 mRNA_1993: 10361 - Hypothetical Protein, at 694051 to 694539 10361

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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690,693 + 0.2
690,715 + -0.1
691,023 - 10360 mRNA_1992 0.11 -1.5
691,255 - 10360 mRNA_1992 0.21 0.3
691,588 - 10360 mRNA_1992 0.35 -0.8
691,715 + 10360 mRNA_1992 0.40 -0.8
691,730 - 10360 mRNA_1992 0.41 -1.0
691,851 + 10360 mRNA_1992 0.46 -1.0
692,036 - 10360 mRNA_1992 0.54 0.3
692,039 + 10360 mRNA_1992 0.54 -0.3
692,190 + 10360 mRNA_1992 0.61 0.0
692,323 + 10360 mRNA_1992 0.67 -0.8
692,457 + 10360 mRNA_1992 0.72 0.5
692,485 + 10360 mRNA_1992 0.74 -0.5
693,067 + 0.2
693,068 - -1.6
693,089 - 0.4
693,095 + -0.1
693,194 - -0.7
693,202 - -0.2
693,210 + 0.8
693,211 + -0.5
693,223 + -0.7
693,223 - -0.1
693,239 + 0.0
693,244 - 0.2
693,248 + -0.5
693,272 + -0.6
693,279 + 0.2
693,315 - -1.6
693,340 - -2.3
693,364 - -0.6
693,374 + -0.0
693,388 - -0.3
693,393 - -0.3
693,399 + -2.0
693,416 - -0.1
693,442 + 0.5
693,553 + -1.2
693,789 - 0.8
693,820 + -0.1
693,839 - -0.3
693,974 + -0.7
694,002 - 0.4