Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1954

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1953: 10321 - K18442 ARFGEF, BIG brefeldin A-inhibited guanine nucleotide-exchange protein, at 594483 to 601309 10321 mRNA_1954: 10322 - Hypothetical Protein, at 601425 to 602462 10322 mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603461 to 605817 10323

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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601,556 - 10322 mRNA_1954 0.13 -0.9
601,562 - 10322 mRNA_1954 0.13 0.2
601,574 + 10322 mRNA_1954 0.14 -0.2
601,749 + 10322 mRNA_1954 0.31 0.9
601,890 + 10322 mRNA_1954 0.45 -1.1
602,017 - 10322 mRNA_1954 0.57 0.2
602,189 - 10322 mRNA_1954 0.74 -0.4
602,471 - 1.5
602,512 + 0.8
603,050 + -0.4
603,052 - 0.4
603,345 - 0.9
603,362 - -0.7
603,385 + 0.2