Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1900

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1899: 10267 - K14946 RBFOX, FOX RNA binding protein fox-1, at 462869 to 464416 10267 mRNA_1900: 10268 - K15071 RCY1, POF6 recyclin-1, at 464695 to 468117 10268 mRNA_1901: 10269 - HMMPfam-Spo7-like protein-PF03907, at 468442 to 470059 10269

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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463,748 - 10267 mRNA_1899 0.57 2.0
463,748 - 10267 mRNA_1899 0.57 -0.3
464,132 - 10267 mRNA_1899 0.82 -0.7
464,274 - -1.7
464,583 + 1.7
464,940 - -1.0
464,984 - -0.4
465,036 + -0.0
465,347 + 10268 mRNA_1900 0.19 -0.8
465,455 - 10268 mRNA_1900 0.22 -0.1
465,753 + 10268 mRNA_1900 0.31 -0.1
466,444 + 10268 mRNA_1900 0.51 0.2
467,341 - 10268 mRNA_1900 0.77 0.3
467,464 + 10268 mRNA_1900 0.81 1.3
467,570 + 10268 mRNA_1900 0.84 0.1
467,590 + 10268 mRNA_1900 0.85 -0.9
467,733 - 10268 mRNA_1900 0.89 -0.4
468,105 - 0.3
468,209 + -1.5
468,247 - -0.3
468,373 - -0.6
468,375 + -0.5
468,382 + -1.1
468,383 - 0.1