Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1892

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1891: 10259 - K03083 GSK3B glycogen synthase kinase 3 beta, at 443414 to 444929 10259 mRNA_1892: 10260 - K15743 CES3_5 carboxylesterase 3/5, at 445526 to 447987 10260 mRNA_1893: 10261 - HMMPfam-Amidohydrolase-PF04909,SUPERFAMILY--SSF51556, at 448641 to 450220 10261

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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444,573 + 10259 mRNA_1891 0.76 -0.5
444,907 - -0.9
445,177 - -0.9
445,187 + 0.8
445,399 - -0.8
445,455 + -0.0
446,563 - 10260 mRNA_1892 0.42 -2.2
446,564 + 10260 mRNA_1892 0.42 -0.1
447,249 - 10260 mRNA_1892 0.70 -0.3
447,402 - 10260 mRNA_1892 0.76 -0.1
447,756 + -0.3
448,125 - -0.4
448,136 + -2.1
448,278 + -0.4
448,288 - -0.1
448,309 + 1.1
448,556 - 0.3
448,566 + -0.3
448,588 + -0.6
448,606 - 0.9
448,713 + 0.0
448,720 + -1.7
448,722 + -0.1
448,730 - -0.9
448,740 + 0.5