Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1825

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1824: 10192 - Hypothetical Protein, at 301582 to 303988 10192 mRNA_1825: 10193 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 304648 to 308455 10193 mRNA_1826: 10194 - Hypothetical Protein, at 308680 to 309068 10194

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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303,973 - 0.0
304,091 + -1.3
304,129 - -1.2
304,163 + -0.1
304,242 + -1.1
304,246 + -0.1
304,262 - -0.9
304,270 - -0.3
304,282 - 0.3
304,411 + -0.1
304,415 - 1.6
304,429 + -0.9
304,565 - 1.2
304,585 + 0.3
304,881 + 0.4
305,174 + 10193 mRNA_1825 0.14 -1.0
305,255 + 10193 mRNA_1825 0.16 -0.7
305,412 - 10193 mRNA_1825 0.20 -0.5
305,457 - 10193 mRNA_1825 0.21 -0.8
305,582 - 10193 mRNA_1825 0.25 -0.5
305,615 + 10193 mRNA_1825 0.25 0.8
305,835 + 10193 mRNA_1825 0.31 1.1
305,869 + 10193 mRNA_1825 0.32 -0.2
306,542 - 10193 mRNA_1825 0.50 0.1
306,551 + 10193 mRNA_1825 0.50 1.7
307,160 - 10193 mRNA_1825 0.66 0.2
307,406 + 10193 mRNA_1825 0.72 -0.4
307,466 - 10193 mRNA_1825 0.74 -0.9
307,760 + 10193 mRNA_1825 0.82 1.2
307,792 + 10193 mRNA_1825 0.83 -0.9
308,037 - 10193 mRNA_1825 0.89 -0.5
308,507 - -0.4
308,633 + 0.0
308,647 + -0.1
308,654 - -0.5
308,777 - 10194 mRNA_1826 0.25 0.0
308,780 - 10194 mRNA_1826 0.26 0.1
308,789 + 10194 mRNA_1826 0.28 0.2
308,847 + 10194 mRNA_1826 0.43 -0.4
308,991 - 10194 mRNA_1826 0.80 0.7