Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1674

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1674: 10042 - K07297 ADIPOR adiponectin receptor, at 860201 to 862501 10042 mRNA_1675: 10043 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 863051 to 864755 10043

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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859,279 - 0.4
859,285 + 1.4
859,330 + -0.1
859,391 - -0.2
859,430 - -0.2
859,430 - 0.1
859,539 + -0.3
859,578 + 0.1
859,685 + -0.7
859,769 - 0.1
859,796 + -0.1
859,952 - -0.5
859,959 - -0.5
859,960 + -0.6
859,971 - -0.1
859,979 + -0.5
860,095 + 1.6
860,104 + -1.1
860,129 + -0.4
860,258 + 0.2
860,266 + -1.1
860,266 + -1.1
860,268 - -0.8
860,278 - -0.1
860,724 + 10042 mRNA_1674 0.23 0.6
861,142 + 10042 mRNA_1674 0.41 0.3
861,243 + 10042 mRNA_1674 0.45 -0.3
861,301 + 10042 mRNA_1674 0.48 -0.2
861,457 + 10042 mRNA_1674 0.55 -0.6
861,592 - 10042 mRNA_1674 0.60 0.4
861,726 - 10042 mRNA_1674 0.66 -0.1
861,866 - 10042 mRNA_1674 0.72 -1.0
862,207 - 10042 mRNA_1674 0.87 -0.1
862,338 + 0.1
862,472 + 1.3
862,603 + 1.6
862,633 + -0.3
862,669 - 0.2
862,773 + -1.3
862,794 + -0.6
862,821 - -1.8
863,083 - 0.1
863,360 - 10043 mRNA_1675 0.18 0.3
863,467 - 10043 mRNA_1675 0.24 2.5
863,480 + 10043 mRNA_1675 0.25 -0.9