Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1624

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1623: 9991 - Hypothetical Protein, at 746291 to 747597 9991 mRNA_1624: 9992 - BLAST calcium-transporting ATPase [Pseudozyma hubeiensi..., at 747802 to 749738 9992 mRNA_1625: 9993 - Hypothetical Protein, at 750034 to 750701 9993

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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747,177 - 9991 mRNA_1623 0.68 -1.8
747,207 - 9991 mRNA_1623 0.70 0.9
747,476 - 0.2
747,478 - -0.9
747,496 - 0.7
747,625 + 1.2
747,632 - 0.5
747,639 + 0.2
747,644 + 0.7
747,789 + -0.9
747,801 + -0.4
747,804 - 1.0
747,805 - -0.6
747,813 + 0.7
747,815 + 0.4
747,823 - 1.5
748,073 - 9992 mRNA_1624 0.14 0.2
748,089 + 9992 mRNA_1624 0.15 1.0
748,090 - 9992 mRNA_1624 0.15 -0.3
748,690 - 9992 mRNA_1624 0.46 -1.4
749,096 - 9992 mRNA_1624 0.67 1.2
749,756 + 0.4
749,976 - 0.2
750,632 - 9993 mRNA_1625 0.90 0.2