Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1612

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1611: 9979 - K04708 E1.1.1.102 3-dehydrosphinganine reductase, at 715902 to 717266 9979 mRNA_1612: 9980 - Hypothetical Protein, at 717528 to 719368 9980 mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719549 to 722839 9981

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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717,311 + -0.7
717,921 - 9980 mRNA_1612 0.21 0.0
718,184 + 9980 mRNA_1612 0.36 0.9
718,242 + 9980 mRNA_1612 0.39 0.3
718,812 + 9980 mRNA_1612 0.70 1.2
718,897 + 9980 mRNA_1612 0.74 0.7
719,049 + 9980 mRNA_1612 0.83 1.1
719,052 - 9980 mRNA_1612 0.83 1.4
719,073 + 9980 mRNA_1612 0.84 -0.4
719,100 + 9980 mRNA_1612 0.85 0.6
719,203 + 0.9
719,507 + 0.8
719,581 - 0.8
720,237 - 9981 mRNA_1613 0.21 1.3