Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1470

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1469: 9837 - KOG1200 Mitochondrial/plastidial beta-ketoacyl-ACP reductase, at 366449 to 367493 9837 mRNA_1470: 9838 - K18592 GGT1_5, CD224 gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase, at 368201 to 370453 9838 mRNA_1471: 9839 - K08874 TRRAP transformation/transcription domain-associated protein, at 370707 to 382935 9839

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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367,617 - 2.1
367,619 + 1.6
367,687 + -1.3
367,721 + -1.3
367,721 - 0.4
367,852 - 0.6
367,867 - 0.2
368,014 + 0.1
368,037 + -0.3
368,131 - 0.8
368,146 - 1.2
368,755 + 9838 mRNA_1470 0.25 0.5
369,024 - 9838 mRNA_1470 0.37 0.1
369,038 + 9838 mRNA_1470 0.37 0.1
369,288 - 9838 mRNA_1470 0.48 0.8
369,499 - 9838 mRNA_1470 0.58 -0.4
369,658 + 9838 mRNA_1470 0.65 2.2
369,666 - 9838 mRNA_1470 0.65 0.7
370,035 - 9838 mRNA_1470 0.81 1.3
370,684 - 0.2