Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1467

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1466: 9834 - BLAST putative catalytic domain thiamin pyrophosphokinase [..., at 352655 to 354087 9834 mRNA_1467: 9835 - HMMPfam-Mannosyl oligosaccharide glucosidase-PF03200,SUPERFAMILY--SSF48208, at 354447 to 358959 9835

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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353,973 - -0.6
353,985 + -0.4
354,103 - 0.3
354,124 - -0.4
354,184 + 0.6
354,210 + 0.3
354,220 - 0.9
354,232 - 0.8
354,241 - 1.2
354,252 + 1.7
354,297 - -0.8
354,339 - 0.7
354,341 + 0.3
354,360 + 0.2
354,365 + 0.1
354,382 + 0.3
354,411 + 0.4
354,424 - 0.8
354,433 - 0.4
354,514 + 1.7
354,540 + 0.4
354,543 + -0.7
354,552 + 0.9
354,592 + 0.2
354,689 - -0.6
354,713 - 0.7
354,720 - 0.2
354,740 + 0.5
354,814 + 1.4
354,859 - 0.7
354,864 + 0.6
355,155 + 9835 mRNA_1467 0.16 0.7
355,433 + 9835 mRNA_1467 0.22 -0.1
356,458 + 9835 mRNA_1467 0.45 1.1
356,610 - 9835 mRNA_1467 0.48 0.2
356,707 + 9835 mRNA_1467 0.50 0.7
357,503 + 9835 mRNA_1467 0.68 0.8
357,512 + 9835 mRNA_1467 0.68 0.2
357,633 - 9835 mRNA_1467 0.71 -1.5
357,796 + 9835 mRNA_1467 0.74 -0.2
358,063 - 9835 mRNA_1467 0.80 0.2
358,096 + 9835 mRNA_1467 0.81 1.4
358,178 + 9835 mRNA_1467 0.83 -1.3
358,816 + -1.6
358,964 + 1.0
359,128 - 0.2
359,131 + -1.0
359,845 - -0.1