Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1466

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1464: 9832 - BLAST conidiation protein Con-6, putative [Aspergillus ..., at 351662 to 352112 9832 mRNA_1465: 9833 - Hypothetical Protein, at 352394 to 352564 9833 mRNA_1466: 9834 - BLAST putative catalytic domain thiamin pyrophosphokinase [..., at 352655 to 354087 9834 mRNA_1467: 9835 - HMMPfam-Mannosyl oligosaccharide glucosidase-PF03200,SUPERFAMILY--SSF48208, at 354447 to 358959 9835

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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351,688 - 1.6
351,907 + 9832 mRNA_1464 0.54 0.5
352,467 + 9833 mRNA_1465 0.43 1.1
352,633 + 0.5
352,659 + 0.3
352,660 - -0.6
352,671 - -0.6
352,679 + -1.2
352,814 + 9834 mRNA_1466 0.11 0.9
352,942 - 9834 mRNA_1466 0.20 1.3
353,092 - 9834 mRNA_1466 0.30 -0.4
353,093 + 9834 mRNA_1466 0.31 -0.8
353,973 - -0.6
353,985 + -0.4
354,103 - 0.3
354,124 - -0.4
354,184 + 0.6
354,210 + 0.3
354,220 - 0.9
354,232 - 0.8
354,241 - 1.2
354,252 + 1.7
354,297 - -0.8
354,339 - 0.7
354,341 + 0.3
354,360 + 0.2
354,365 + 0.1
354,382 + 0.3
354,411 + 0.4
354,424 - 0.8
354,433 - 0.4
354,514 + 1.7
354,540 + 0.4
354,543 + -0.7
354,552 + 0.9
354,592 + 0.2
354,689 - -0.6
354,713 - 0.7
354,720 - 0.2
354,740 + 0.5
354,814 + 1.4
354,859 - 0.7
354,864 + 0.6