Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1406

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1406: 9774 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 195890 to 197396 9774

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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195,108 + 0.7
195,111 - 0.1
195,246 - -0.5
195,263 - -0.1
195,408 + 1.2
195,437 - 0.7
195,446 + 0.6
195,447 + -1.3
195,448 - -0.0
195,454 + 0.9
195,458 - 0.4
195,470 + -0.1
195,471 + 0.0
195,476 + 0.4
195,487 - 0.0
195,487 - 1.1
195,489 - 0.6
195,491 - -0.0
195,497 + 1.2
195,507 + 1.0
195,510 - -0.5
195,512 + 0.2
195,522 - 0.2
195,529 - 0.1
195,535 + -0.1
195,539 + -0.1
195,543 + -0.1
195,551 + 1.0
195,554 - 0.7
195,554 - -1.2
195,554 - 0.0
195,555 + 0.9
195,571 + 0.8
195,575 + 0.0
195,584 + 0.6
195,591 - -0.1
195,591 - 0.0
195,623 + 1.1
195,636 - -0.6
195,636 - 0.1
195,742 - 0.5
195,760 + 0.1
195,796 - 0.5
195,884 - 1.2
196,009 - 0.7
196,201 - 9774 mRNA_1406 0.21 0.3
196,212 + 9774 mRNA_1406 0.21 0.6
196,219 - 9774 mRNA_1406 0.22 0.6
196,368 + 9774 mRNA_1406 0.32 0.2
196,382 - 9774 mRNA_1406 0.33 0.3
196,499 + 9774 mRNA_1406 0.40 -0.5
196,602 + 9774 mRNA_1406 0.47 -0.2
196,649 - 9774 mRNA_1406 0.50 -0.1
196,768 - 9774 mRNA_1406 0.58 0.1
197,073 + 9774 mRNA_1406 0.79 0.3
197,228 + 9774 mRNA_1406 0.89 0.9
197,349 - 0.2
197,497 - 0.2
197,509 - 0.6
198,111 - 0.3
198,275 + 0.9