Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1396

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1396: 9764 - Hypothetical Protein, at 172419 to 173406 9764 mRNA_1397: 9765 - K03242 EIF2S3 translation initiation factor 2 subunit 3, at 173685 to 176206 9765

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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171,513 - 0.1
171,624 - 0.5
171,646 - 0.1
171,652 - -0.6
171,654 - 0.1
171,922 + 0.3
171,923 + 1.2
171,934 + -0.4
171,936 - 0.0
171,937 + 0.4
171,953 + 0.2
172,056 - 0.2
172,797 - 9764 mRNA_1396 0.38 0.8
172,804 + 9764 mRNA_1396 0.39 -0.7
172,907 + 9764 mRNA_1396 0.49 0.7
172,969 - 9764 mRNA_1396 0.56 1.4
173,113 - 9764 mRNA_1396 0.70 0.4
173,270 - 9764 mRNA_1396 0.86 -0.1
173,376 - 0.7