Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1371

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1370: 9738 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 112389 to 113571 9738 mRNA_1371: 9739 - KOG3024 Uncharacterized conserved protein, at 114058 to 115447 9739 mRNA_1372: 9740 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 115782 to 116339 9740

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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113,065 + 9738 mRNA_1370 0.57 2.0
113,072 - 9738 mRNA_1370 0.58 0.3
113,181 - 9738 mRNA_1370 0.67 0.2
113,369 + 9738 mRNA_1370 0.83 1.2
113,492 + 0.5
113,508 + 0.1
113,631 - 0.5
113,636 - 0.3
113,637 - -0.3
113,744 - 0.6
113,944 + 0.6
113,945 - -0.2
113,949 - 0.3
114,220 - 9739 mRNA_1371 0.12 -0.3
114,248 + 9739 mRNA_1371 0.14 -1.3
115,527 - 0.4
115,843 - 9740 mRNA_1372 0.11 0.6
116,036 + 9740 mRNA_1372 0.46 -0.3
116,187 + 9740 mRNA_1372 0.73 0.7
116,267 + 9740 mRNA_1372 0.87 -0.0
116,419 - 0.1
116,420 + -0.5