Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1361

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728 mRNA_1361: 9729 - Hypothetical Protein, at 90771 to 91579 9729 mRNA_1362: 9730 - K00507 SCD, desC stearoyl-CoA desaturase (Delta-9 desaturase), at 92515 to 94818 9730

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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89,965 + 9728 mRNA_1360 0.87 0.9
90,038 + -0.3
90,068 + 0.5
90,145 - -0.4
90,242 - 0.9
90,326 - 1.5
90,328 + 0.2
90,335 - 0.5
90,349 + 0.7
90,350 + 0.4
90,356 + 0.6
90,364 + 0.3
90,374 + -0.1
90,376 - 1.2
90,378 - 0.0
90,532 - 1.0
90,534 - 0.1
90,556 + -0.2
90,568 + 0.6
90,606 - -0.3
90,696 + -0.5
90,709 + 1.5
90,822 - 0.3
90,901 - 9729 mRNA_1361 0.16 0.1
91,118 - 9729 mRNA_1361 0.43 1.1
91,123 - 9729 mRNA_1361 0.44 -0.4
91,268 + 9729 mRNA_1361 0.61 -0.4
91,334 + 9729 mRNA_1361 0.70 -0.1
91,554 - 0.7
91,689 + 1.5
91,699 + 0.1
91,714 + 0.4
91,818 - -0.2
91,935 - -0.2
91,935 - -2.2
91,938 + 1.0
91,959 - 1.4
91,978 - 0.1
92,007 + 1.4
92,008 + 1.5
92,008 + -0.3
92,010 + 0.5
92,027 + -1.5
92,058 - 1.9
92,090 - -0.6
92,094 + -1.1
92,105 - 0.7
92,128 + 0.8
92,131 - 1.8
92,142 - 0.3
92,143 + 0.6
92,155 + 0.4
92,162 - 0.3
92,176 - -0.8
92,206 + -1.1
92,212 + -0.4
92,212 - 1.3
92,221 - 0.8
92,255 - -0.2
92,270 - 0.6
92,272 - 0.6
92,282 - -0.2
92,285 + 1.3
92,291 + 0.8
92,295 - 1.4
92,302 - 0.7
92,308 + -0.5