Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1338

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1337: 9705 - K17732 PMPCB, MAS1 mitochondrial-processing peptidase subunit beta, at 29044 to 31153 9705 mRNA_1338: 9706 - SUPERFAMILY--SSF52047, at 31623 to 33145 9706 mRNA_1339: 9707 - Hypothetical Protein, at 33554 to 34142 9707

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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31,204 + 0.7
31,259 + 0.9
31,264 - 0.1
31,362 + 1.8
31,634 + -0.1
31,951 - 9706 mRNA_1338 0.22 -0.5
32,104 + 9706 mRNA_1338 0.32 -0.3
32,107 - 9706 mRNA_1338 0.32 0.8
32,355 - 9706 mRNA_1338 0.48 0.2
32,360 - 9706 mRNA_1338 0.48 -0.8
32,401 + 9706 mRNA_1338 0.51 0.8
32,678 + 9706 mRNA_1338 0.69 1.1
32,848 + 9706 mRNA_1338 0.80 -0.2
32,867 - 9706 mRNA_1338 0.82 -0.5
32,966 - 9706 mRNA_1338 0.88 1.2
33,122 + -0.4
33,132 - 0.6
33,132 - 1.0
33,135 - 1.3
33,142 + 0.1
33,275 - 0.6
33,279 - 0.8
33,291 + 0.8
33,424 - -0.4
33,429 + 0.5
33,532 - 2.6
33,579 - 0.4
33,583 + 1.5
33,596 - -0.4
33,617 + 9707 mRNA_1339 0.11 -0.7
33,627 + 9707 mRNA_1339 0.12 0.7
33,644 - 9707 mRNA_1339 0.15 1.1
33,669 - 9707 mRNA_1339 0.20 0.4
33,697 + 9707 mRNA_1339 0.24 0.7
33,773 - 9707 mRNA_1339 0.37 1.6
33,780 - 9707 mRNA_1339 0.38 -0.3
34,141 + -0.3