Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1326

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1696 9694 mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1 + -0.1
25 + 0.1
49 - 0.6
50 + 0.5
53 + -0.7
57 - -0.1
57 + 0.5
58 - -0.8
62 + -0.5
62 - 0.2
76 + -0.8
109 + 0.5
122 + 0.1
125 - 0.5
126 + -0.3
128 - 0.1
134 + 0.1
143 + 1.5
144 + 0.1
148 + 0.4
176 - -0.8
186 + 0.1
199 + 0.7
240 + -0.1
240 + 0.2
250 + -0.1
250 + -0.3
256 - 0.8
279 + 0.3
282 + 0.4
286 - -0.1
290 + 0.9
542 - 9694 mRNA_1326 0.21 -0.0
545 + 9694 mRNA_1326 0.22 -0.6
726 - 9694 mRNA_1326 0.34 -0.3
1,007 + 9694 mRNA_1326 0.53 -0.8
1,016 - 9694 mRNA_1326 0.54 -0.3
1,322 - 9694 mRNA_1326 0.74 -0.2
1,417 - 9694 mRNA_1326 0.81 0.5
1,888 - 0.3
1,889 - -1.2
2,000 + -1.0
2,009 + 0.1
2,141 - 0.4
2,152 - 0.2
2,166 + -0.1
2,167 + 0.9
2,173 + -0.9
2,180 - -0.6
2,180 + 1.0
2,189 + 0.6
2,189 + 0.5
2,197 + -0.9
2,246 + 0.7
2,333 - 1.8
2,471 + 0.2
2,490 + 0.2