Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1293

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1292: 9660 - K10848 ERCC4, XPF DNA excision repair protein ERCC-4, at 846383 to 850419 9660 mRNA_1293: 9661 - Hypothetical Protein, at 850858 to 851999 9661 mRNA_1294: 9662 - K20369 ERV29, SURF4 ER-derived vesicles protein, at 852831 to 853984 9662

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
849,896 - 9660 mRNA_1292 0.87 0.5
850,122 - 0.9
850,141 - 0.6
850,148 + -0.3
850,290 - 0.1
850,299 + 0.8
850,307 + 0.1
850,325 - -0.1
850,344 + 0.2
850,420 + 0.2
850,487 + 0.4
850,546 - -0.0
850,602 - -0.1
850,740 - 0.5
850,743 - -1.3
850,744 - -0.7
850,884 + 0.1
850,936 + 0.5
851,035 + 9661 mRNA_1293 0.15 1.1
851,206 - 9661 mRNA_1293 0.30 1.0
851,531 + 9661 mRNA_1293 0.59 0.8
851,656 + 9661 mRNA_1293 0.70 -0.6
851,730 + 9661 mRNA_1293 0.76 0.5
851,768 - 9661 mRNA_1293 0.80 -0.7
851,859 - 9661 mRNA_1293 0.88 1.3
851,863 - 9661 mRNA_1293 0.88 0.9
851,882 - 9661 mRNA_1293 0.90 0.3
851,891 - -0.4
851,897 + 0.3
851,900 + 0.2
851,906 - 0.2
851,914 - 1.3
851,917 + 0.3
852,137 - -0.0
852,277 - -0.2
852,338 - 1.1
852,343 + 0.4
852,353 + 1.7
852,356 + 0.8
852,359 + -0.6
852,362 + 1.0
852,372 + 0.3
852,490 - -0.0
852,492 + 1.8
852,501 - -0.2
852,510 - 1.3
852,637 - 0.2
852,925 - 0.4