Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1265

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1264: 9632 - HMMPfam-Mitochondrial ribosomal protein subunit L20-PF12824, at 783698 to 784459 9632 mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784543 to 790877 9633 mRNA_1266: 9634 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 791102 to 792635 9634

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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783,615 - 0.2
783,625 - 0.8
783,709 - 0.1
784,354 + 9632 mRNA_1264 0.86 0.7
784,355 + 9632 mRNA_1264 0.86 0.1
784,358 - 9632 mRNA_1264 0.87 -0.1
784,358 + 9632 mRNA_1264 0.87 1.1
784,359 - 9632 mRNA_1264 0.87 -0.0
784,363 + 9632 mRNA_1264 0.87 0.7
784,372 - 9632 mRNA_1264 0.88 0.6
784,381 + 9632 mRNA_1264 0.90 -0.2
784,415 - 1.0
784,489 - -0.2
784,526 + 0.0
786,124 - 9633 mRNA_1265 0.25 0.5
787,944 - 9633 mRNA_1265 0.54 1.1
791,013 + -0.3
791,024 - 0.7
791,024 - 0.1
791,025 + 0.4
791,027 - 0.5
791,041 + -0.1
791,044 - 0.9
791,045 - -0.1
791,177 + -0.0
791,703 - 9634 mRNA_1266 0.39 -0.1
791,740 + 9634 mRNA_1266 0.42 0.1