Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1257

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1256: 9624 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 767980 to 768375 9624 mRNA_1257: 9625 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 768823 to 770242 9625 mRNA_1258: 9626 - Hypothetical Protein, at 770373 to 771317 9626

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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767,910 + 0.7
767,914 - 0.6
768,001 + 0.5
768,011 + -1.5
768,383 - 0.5
768,531 - -0.1
768,537 + -0.1
768,631 + 0.8
768,753 + 0.2
768,768 + -0.8
769,036 - 9625 mRNA_1257 0.15 -0.2
769,095 - 9625 mRNA_1257 0.19 1.9
769,212 + 9625 mRNA_1257 0.27 0.8
769,362 - 9625 mRNA_1257 0.38 -0.3
769,369 + 9625 mRNA_1257 0.38 -0.2
769,371 - 9625 mRNA_1257 0.39 1.3
769,398 - 9625 mRNA_1257 0.40 -0.4
769,450 + 9625 mRNA_1257 0.44 0.4
769,512 - 9625 mRNA_1257 0.49 -0.7
769,541 + 9625 mRNA_1257 0.51 0.8
769,692 - 9625 mRNA_1257 0.61 0.2
769,693 + 9625 mRNA_1257 0.61 0.4
769,695 + 9625 mRNA_1257 0.61 -0.2
769,950 + 9625 mRNA_1257 0.79 0.4
769,983 - 9625 mRNA_1257 0.82 -0.6
770,068 + 9625 mRNA_1257 0.88 0.1
770,267 + -0.2
770,409 - 0.6