Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1248

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1247: 9615 - Hypothetical Protein, at 745328 to 746839 9615 mRNA_1248: 9616 - KOG1289 Amino acid transporters, at 747049 to 750301 9616 mRNA_1249: 9617 - Hypothetical Protein, at 750828 to 752844 9617

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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746,143 + 9615 mRNA_1247 0.54 -0.5
746,257 + 9615 mRNA_1247 0.61 0.8
746,341 - 9615 mRNA_1247 0.67 0.4
746,380 + 9615 mRNA_1247 0.70 -0.1
746,521 + 9615 mRNA_1247 0.79 0.6
746,831 - 0.7
747,123 + 0.2
747,147 + 1.7
747,251 + 0.9
747,491 - 9616 mRNA_1248 0.14 0.5
747,560 + 9616 mRNA_1248 0.16 -0.2
747,573 + 9616 mRNA_1248 0.16 0.9
747,694 + 9616 mRNA_1248 0.20 -1.7
747,702 + 9616 mRNA_1248 0.20 -0.0
747,732 + 9616 mRNA_1248 0.21 0.8
747,839 + 9616 mRNA_1248 0.24 -1.6
747,988 + 9616 mRNA_1248 0.29 0.3
748,426 + 9616 mRNA_1248 0.42 0.3
748,729 + 9616 mRNA_1248 0.52 0.6
748,887 - 9616 mRNA_1248 0.57 -0.3
748,987 + 9616 mRNA_1248 0.60 -0.3
749,315 + 9616 mRNA_1248 0.70 -0.1
749,371 - 9616 mRNA_1248 0.71 0.0
749,440 + 9616 mRNA_1248 0.74 1.2
749,645 - 9616 mRNA_1248 0.80 0.4
749,745 - 9616 mRNA_1248 0.83 0.3
749,801 + 9616 mRNA_1248 0.85 -0.9
749,881 + 9616 mRNA_1248 0.87 0.4
749,913 - 9616 mRNA_1248 0.88 1.0
749,932 - 9616 mRNA_1248 0.89 0.3
749,933 + 9616 mRNA_1248 0.89 0.7
750,023 - -0.9
750,056 - 0.4
750,125 - 0.7
750,154 - -0.2
750,158 - -0.1
750,184 - 1.2
750,204 - -0.2
750,213 - 1.1
750,217 - 1.1
750,220 + -0.3
750,226 - 0.4
750,328 - -0.1
750,469 + 0.1
750,496 - 0.2
750,506 + 0.3
750,559 + 0.3
750,570 + 0.2
750,660 + 0.2
750,690 + 1.2
750,824 + 0.5
750,838 - 1.8
751,275 + 9617 mRNA_1249 0.22 0.6