Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1193

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1192: 9560 - KOG2504 Monocarboxylate transporter, at 616392 to 618414 9560 mRNA_1193: 9561 - KOG2504 Monocarboxylate transporter, at 618729 to 620711 9561 mRNA_1194: 9562 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 621153 to 623607 9562

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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617,921 - 9560 mRNA_1192 0.76 1.2
617,953 + 9560 mRNA_1192 0.77 0.1
618,052 + 9560 mRNA_1192 0.82 0.4
618,052 - 9560 mRNA_1192 0.82 0.5
618,192 - 9560 mRNA_1192 0.89 -0.8
618,229 - -0.5
618,229 + -0.1
618,244 + 0.0
618,371 + 0.0
618,381 + 1.8
618,405 + -0.1
618,416 - 0.4
618,417 + -0.8
618,418 + -0.7
618,418 + 0.9
618,418 + -0.5
618,418 + 0.4
618,418 + 0.2
618,419 + 0.8
618,419 + 1.1
618,425 + -0.0
618,530 + 0.2
618,536 + 1.3
618,576 + 0.4
618,627 - 1.3
618,638 - 1.8
618,641 - 0.5
618,667 + 0.2
618,681 - -0.5
618,710 + 0.2
618,713 - 0.3
618,773 + -0.5
618,931 - 9561 mRNA_1193 0.10 1.0
619,053 + 9561 mRNA_1193 0.16 0.7
619,270 + 9561 mRNA_1193 0.27 0.2
619,427 - 9561 mRNA_1193 0.35 0.5
619,428 - 9561 mRNA_1193 0.35 0.7
619,663 - 9561 mRNA_1193 0.47 -0.1
619,993 - 9561 mRNA_1193 0.64 0.4
620,167 - 9561 mRNA_1193 0.73 0.9
620,190 + 9561 mRNA_1193 0.74 0.4
620,190 + 9561 mRNA_1193 0.74 1.2
620,191 - 9561 mRNA_1193 0.74 -0.5
620,254 - 9561 mRNA_1193 0.77 0.4
620,450 - 9561 mRNA_1193 0.87 -2.3
620,542 + -0.3
620,584 - 0.4
620,724 - 1.6
620,875 + 1.8
620,885 + 0.4
621,036 + 2.4
621,055 - 1.5
621,057 + -0.5
621,163 - 1.8
621,192 + 0.6
621,305 + 1.0
621,397 + -1.2
621,398 + -1.0
621,695 - 9562 mRNA_1194 0.22 0.7