Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1176

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1175: 9543 - Hypothetical Protein, at 577542 to 578636 9543 mRNA_1176: 9544 - Hypothetical Protein, at 578866 to 579597 9544 mRNA_1177: 9545 - K15326 TSEN54 tRNA-splicing endonuclease subunit Sen54, at 580188 to 581963 9545

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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577,881 - 9543 mRNA_1175 0.31 0.3
577,991 + 9543 mRNA_1175 0.41 1.5
578,076 - 9543 mRNA_1175 0.49 -0.1
578,084 + 9543 mRNA_1175 0.49 0.4
578,485 - 9543 mRNA_1175 0.86 -0.0
578,787 + 0.3
578,798 - 0.3
578,936 + 0.7
578,954 - 9544 mRNA_1176 0.12 -0.0
579,077 - 9544 mRNA_1176 0.29 0.8
579,097 + 9544 mRNA_1176 0.32 0.8
579,097 + 9544 mRNA_1176 0.32 -0.8
579,377 + 9544 mRNA_1176 0.70 2.3
579,410 + 9544 mRNA_1176 0.74 1.9
579,415 - 9544 mRNA_1176 0.75 -0.9
579,422 - 9544 mRNA_1176 0.76 0.7
579,547 + 1.0
579,554 - 0.4
579,555 + -1.0
579,934 - 0.0
579,955 - -0.1
579,957 - 1.9
579,963 + 0.4
580,089 - -0.6