Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1175

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1174: 9542 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 575723 to 577057 9542 mRNA_1175: 9543 - Hypothetical Protein, at 577542 to 578636 9543 mRNA_1176: 9544 - Hypothetical Protein, at 578866 to 579597 9544

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
576,542 - 9542 mRNA_1174 0.61 0.8
576,548 + 9542 mRNA_1174 0.62 0.1
576,571 + 9542 mRNA_1174 0.64 0.1
576,600 - 9542 mRNA_1174 0.66 0.4
576,649 - 9542 mRNA_1174 0.69 0.3
576,688 - 9542 mRNA_1174 0.72 -0.2
576,742 - 9542 mRNA_1174 0.76 0.6
576,745 - 9542 mRNA_1174 0.77 0.1
576,857 + 9542 mRNA_1174 0.85 -0.2
576,979 + -0.1
576,984 + 1.4
577,026 + 0.8
577,118 - -0.3
577,139 - -0.3
577,610 + 0.0
577,639 + 1.2
577,824 - 9543 mRNA_1175 0.26 0.9
577,854 + 9543 mRNA_1175 0.28 -0.9
577,881 - 9543 mRNA_1175 0.31 0.3
577,991 + 9543 mRNA_1175 0.41 1.5
578,076 - 9543 mRNA_1175 0.49 -0.1
578,084 + 9543 mRNA_1175 0.49 0.4
578,485 - 9543 mRNA_1175 0.86 -0.0
578,787 + 0.3
578,798 - 0.3
578,936 + 0.7
578,954 - 9544 mRNA_1176 0.12 -0.0
579,077 - 9544 mRNA_1176 0.29 0.8
579,097 + 9544 mRNA_1176 0.32 0.8
579,097 + 9544 mRNA_1176 0.32 -0.8
579,377 + 9544 mRNA_1176 0.70 2.3
579,410 + 9544 mRNA_1176 0.74 1.9
579,415 - 9544 mRNA_1176 0.75 -0.9
579,422 - 9544 mRNA_1176 0.76 0.7
579,547 + 1.0
579,554 - 0.4
579,555 + -1.0