Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1131

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1130: 9498 - KOG1773 Stress responsive protein, at 479991 to 480650 9498 mRNA_1131: 9499 - K01758 CTH cystathionine gamma-lyase, at 480949 to 482653 9499 mRNA_1132: 9500 - K20362 YIF1 protein transport protein YIF1, at 483022 to 484511 9500

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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479,979 - 2.6
480,237 - 9498 mRNA_1130 0.37 -0.7
480,607 - 1.7
480,679 - 0.3
480,707 - -0.4
480,711 + -0.1
480,715 + 0.4
480,734 - -0.8
480,921 - 1.8
481,754 - 9499 mRNA_1131 0.47 0.8
481,754 + 9499 mRNA_1131 0.47 0.2
481,865 - 9499 mRNA_1131 0.54 -0.0
481,879 - 9499 mRNA_1131 0.55 0.3
482,068 + 9499 mRNA_1131 0.66 0.4
482,078 + 9499 mRNA_1131 0.66 1.0
482,296 - 9499 mRNA_1131 0.79 0.1
482,328 + 9499 mRNA_1131 0.81 0.4
482,446 - 9499 mRNA_1131 0.88 3.2
482,482 + 9499 mRNA_1131 0.90 -0.0
482,606 - 0.7
482,615 + -0.8
482,628 - 0.3
482,739 - 0.8
482,746 + 0.6
482,764 + 0.6
482,777 + 0.3
482,818 + -1.0
482,828 - 0.2