Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1095

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1094: 9462 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 393718 to 395326 9462 mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395816 to 397150 9463 mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397231 to 398090 9464

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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395,065 + 9462 mRNA_1094 0.84 0.2
395,211 - 0.5
395,247 + 1.3
395,314 - 0.3
395,344 + 0.4
395,473 + 0.9
395,657 - 0.3
395,815 - -2.0
395,823 + -0.2
396,101 + 9463 mRNA_1095 0.21 0.4
396,114 + 9463 mRNA_1095 0.22 -0.9
396,539 - 9463 mRNA_1095 0.54 -0.2
396,955 - 9463 mRNA_1095 0.85 1.3
397,100 + 0.4
397,134 - 1.9
397,290 + 1.2
397,510 - 9464 mRNA_1096 0.32 1.5
397,788 + 9464 mRNA_1096 0.65 1.8
397,992 + 9464 mRNA_1096 0.88 -0.1