Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1055

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1055: 9423 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 292025 to 293259 9423

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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291,083 - 0.6
291,088 - 0.8
291,093 - 0.3
291,102 + -0.0
291,146 - 1.1
291,157 - -0.4
291,158 + 0.8
291,199 + 0.1
291,253 - 1.9
291,269 + -0.1
291,321 - 2.4
291,383 - 1.5
291,415 + 0.9
291,429 + 0.0
291,444 - 2.0
291,448 - 0.4
291,460 + 0.2
291,460 + 0.7
291,462 - -0.0
291,467 + 1.4
291,482 + 0.0
291,500 + -0.1
291,513 + 0.9
291,627 - -0.8
291,633 - -0.1
291,642 + -0.2
291,662 - 0.8
291,664 - 1.1
291,668 + 1.1
291,669 + 0.5
291,681 + 1.3
291,685 + -0.5
291,685 - 1.5
291,739 + 0.4
291,740 + 1.1
291,743 - 0.8
291,747 + 0.7
291,748 - 0.6
291,752 - 0.5
291,761 - -1.0
291,767 - 0.6
291,778 - -0.1
291,779 + 0.2
291,779 + -0.2
291,797 + -0.3
291,801 + -0.3
291,809 - -0.1
291,813 + 0.8
291,816 - 1.2
291,845 - 0.5
291,850 - 0.3
291,853 + 0.7
291,867 + 0.4
291,869 - -0.6
291,873 - 0.5
291,873 + 1.1
291,889 - 0.2
291,903 + 0.1
291,935 + -0.0
291,987 - 0.6
292,012 + -0.2
292,017 + 1.3
292,036 + 0.5
292,040 + 0.4
292,644 + 9423 mRNA_1055 0.50 0.4
292,893 + 9423 mRNA_1055 0.70 -0.3
293,339 + -0.3
293,344 + 0.5
293,346 - 0.1
293,349 + 0.1
293,488 + 0.6
293,495 - 0.8
293,500 + 0.5
293,584 + -0.1
293,589 - 0.3
293,596 - 0.7
293,650 + 0.1
293,658 + 0.2
294,211 - 0.6