Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_988

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_987: 9355 - K04773 sppA protease IV, at 140246 to 143358 9355 mRNA_988: 9356 - BLAST glycerol-3-phosphate O-acyltransferase [Sanghuangporu..., at 143512 to 144351 9356 mRNA_989: 9357 - Hypothetical Protein, at 144518 to 146452 9357

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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142,663 + 9355 mRNA_987 0.78 0.5
142,673 - 9355 mRNA_987 0.78 1.3
142,895 + 9355 mRNA_987 0.85 0.5
142,963 + 9355 mRNA_987 0.87 0.1
143,099 - 1.1
143,122 - 0.3
143,283 - -0.3
143,401 - 1.0
143,416 + -0.3
143,434 + -0.3
143,435 + 0.0
143,436 + -0.3
143,735 - 9356 mRNA_988 0.27 1.7
143,738 - 9356 mRNA_988 0.27 1.4
144,277 + -0.5
144,431 - 0.7