Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_971

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_971: 9339 - KOG2262 Sexual differentiation process protein ISP4, at 104337 to 107412 9339 mRNA_972: 9340 - Hypothetical Protein, at 107840 to 108806 9340

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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103,931 + 0.9
104,023 - -1.3
104,064 - -0.2
104,075 - -0.5
104,076 + 0.3
104,080 + 0.8
104,089 + 0.4
104,090 + 0.5
104,093 - 0.9
104,098 - -0.2
104,111 - 1.3
104,119 + -0.1
104,126 + -0.1
104,185 + -0.0
104,239 + 0.4
104,254 - -0.0
104,271 + 1.1
104,284 - 0.3
104,307 + -0.2
104,335 - -0.2
104,373 + 1.0
104,373 + -0.2
104,376 - 0.3
104,380 + 1.6
104,382 + 0.0
104,386 + 0.3
104,416 + 0.7
104,433 - -0.6
104,442 + 1.2
104,445 + 0.2
104,487 + -0.0
104,546 - -0.2
104,696 + 9339 mRNA_971 0.12 -0.0
104,833 + 9339 mRNA_971 0.16 0.2
104,834 + 9339 mRNA_971 0.16 -1.2
104,837 - 9339 mRNA_971 0.16 1.0
104,856 + 9339 mRNA_971 0.17 1.1
104,860 + 9339 mRNA_971 0.17 0.2
104,925 - 9339 mRNA_971 0.19 0.2
104,979 + 9339 mRNA_971 0.21 0.4
105,012 + 9339 mRNA_971 0.22 0.7
105,062 + 9339 mRNA_971 0.24 -0.2
105,096 - 9339 mRNA_971 0.25 -0.7
105,129 - 9339 mRNA_971 0.26 -1.2
105,517 - 9339 mRNA_971 0.38 0.6
105,580 + 9339 mRNA_971 0.40 1.2
105,584 + 9339 mRNA_971 0.41 -0.9
105,611 + 9339 mRNA_971 0.41 0.3
105,638 - 9339 mRNA_971 0.42 0.5
105,705 - 9339 mRNA_971 0.44 0.7
105,713 + 9339 mRNA_971 0.45 0.9
105,762 + 9339 mRNA_971 0.46 0.2
106,020 - 9339 mRNA_971 0.55 -0.8
106,238 - 9339 mRNA_971 0.62 1.0
106,267 + 9339 mRNA_971 0.63 -0.0
106,281 + 9339 mRNA_971 0.63 0.5
106,303 + 9339 mRNA_971 0.64 0.0
106,545 + 9339 mRNA_971 0.72 0.4
106,567 + 9339 mRNA_971 0.72 -0.1
106,578 - 9339 mRNA_971 0.73 0.8
106,637 - 9339 mRNA_971 0.75 -0.5
106,754 - 9339 mRNA_971 0.79 -0.6
106,770 - 9339 mRNA_971 0.79 0.2
106,892 + 9339 mRNA_971 0.83 0.1
107,017 + 9339 mRNA_971 0.87 0.1
107,023 - 9339 mRNA_971 0.87 -0.2
107,031 + 9339 mRNA_971 0.88 -0.2
107,040 + 9339 mRNA_971 0.88 0.6
107,122 + -1.8
107,184 - 0.4
107,213 + 1.3
107,218 - -0.1
107,233 + 0.4
107,266 + 0.6
107,327 - 0.4
107,340 - -0.1
107,345 + 0.6
107,352 + 0.8
107,363 - 2.3
107,370 + -0.9
107,430 + 0.2
107,461 - 1.0
107,464 - 0.4
107,471 + -0.3
107,483 - -0.1
107,488 - 0.0
107,490 + -1.1
107,491 - 1.1
107,499 - -0.3
107,499 - 0.8
107,499 - -0.3
107,500 + 0.0
107,508 - -0.6
107,509 + -0.3
107,515 + 0.8
107,515 - -1.5
107,519 - 0.0
107,522 - -1.6
107,523 + -0.5
107,524 + 0.3
107,526 + -1.2
107,535 + -0.7
107,537 + 0.7
107,540 - 0.0
107,548 + 0.8
107,548 - 1.4
107,554 + 0.8
107,559 - 0.4
107,560 + -0.2
107,560 - 1.7
107,567 + 0.3
107,571 - 1.2
107,576 - 1.1
107,577 + 0.3
107,581 - 1.0
107,585 - -0.2
107,585 - 0.1
107,585 + -0.2
107,585 + 1.4
107,586 + -0.5
107,640 + 0.5
107,645 - -1.9
107,653 + -0.8
107,674 - 0.0
107,683 - 0.4
107,687 - 0.4
107,690 - 0.9
107,691 + -0.7
107,693 - 0.6
107,693 - 0.2
107,698 + 0.1
107,700 - 1.3
107,712 + -0.7
107,713 - 0.2
107,714 - 0.4
107,717 - -0.1
107,719 - 0.2
107,720 - 0.3
107,721 - 0.7
107,729 + 0.4
107,730 - 0.9
107,731 + 1.5
107,738 + 0.7
107,739 + 0.9
107,739 + 1.7
107,756 - 0.2
107,763 + 0.6
107,799 + 0.5
107,804 + 0.8
107,804 - 0.5
107,808 + 0.9
107,816 - -0.9
107,838 - -0.6
107,838 - -1.3
107,853 + -0.5
107,865 + 0.0
107,866 + 0.5
107,866 + 1.8
107,882 - 1.5
107,883 - 0.4
107,891 - 0.5
107,895 - 0.1
107,896 + 0.7
107,897 - 0.2
107,898 + 0.8
107,898 + 0.1
107,907 - -1.8
107,909 - 2.0
107,909 - 0.6
107,910 + 1.8
107,910 + 0.1
107,913 + 0.6
107,914 - -0.1
107,914 - 0.1
107,921 + -0.2
107,923 - -0.3
107,928 + 0.7
107,929 - -0.0
107,933 - 0.5
107,943 + 9340 mRNA_972 0.11 1.0
107,948 - 9340 mRNA_972 0.11 -0.2
107,951 - 9340 mRNA_972 0.11 0.6
107,954 + 9340 mRNA_972 0.12 -1.5
107,958 - 9340 mRNA_972 0.12 -0.4
107,962 + 9340 mRNA_972 0.13 -0.5
107,966 + 9340 mRNA_972 0.13 0.0
107,978 + 9340 mRNA_972 0.14 0.4
107,980 - 9340 mRNA_972 0.14 0.7
108,046 + 9340 mRNA_972 0.21 1.1
108,065 + 9340 mRNA_972 0.23 1.4
108,071 - 9340 mRNA_972 0.24 0.4
108,084 + 9340 mRNA_972 0.25 1.2
108,089 + 9340 mRNA_972 0.26 1.1
108,099 - 9340 mRNA_972 0.27 -0.4
108,114 + 9340 mRNA_972 0.28 0.4
108,117 - 9340 mRNA_972 0.29 -1.2
108,127 - 9340 mRNA_972 0.30 -0.1
108,128 - 9340 mRNA_972 0.30 0.2
108,131 + 9340 mRNA_972 0.30 0.2
108,131 + 9340 mRNA_972 0.30 -1.5
108,139 - 9340 mRNA_972 0.31 0.1
108,145 + 9340 mRNA_972 0.32 0.4
108,147 - 9340 mRNA_972 0.32 0.2
108,166 + 9340 mRNA_972 0.34 1.4
108,169 + 9340 mRNA_972 0.34 0.1
108,192 - 9340 mRNA_972 0.36 0.3
108,197 + 9340 mRNA_972 0.37 0.8
108,215 + 9340 mRNA_972 0.39 0.5
108,220 + 9340 mRNA_972 0.39 -0.0
108,228 - 9340 mRNA_972 0.40 0.0
108,231 - 9340 mRNA_972 0.40 1.4
108,233 - 9340 mRNA_972 0.41 -0.0
108,233 + 9340 mRNA_972 0.41 -0.4
108,234 - 9340 mRNA_972 0.41 0.3
108,247 - 9340 mRNA_972 0.42 0.3
108,248 + 9340 mRNA_972 0.42 0.1
108,250 + 9340 mRNA_972 0.42 -0.1
108,252 - 9340 mRNA_972 0.43 0.7
108,254 + 9340 mRNA_972 0.43 1.8
108,257 - 9340 mRNA_972 0.43 2.0
108,259 + 9340 mRNA_972 0.43 0.3
108,261 - 9340 mRNA_972 0.44 0.3
108,265 - 9340 mRNA_972 0.44 0.7
108,266 + 9340 mRNA_972 0.44 0.6
108,270 - 9340 mRNA_972 0.44 -0.2
108,270 - 9340 mRNA_972 0.44 1.7
108,271 + 9340 mRNA_972 0.45 0.2
108,271 + 9340 mRNA_972 0.45 -0.4
108,273 - 9340 mRNA_972 0.45 0.5
108,286 - 9340 mRNA_972 0.46 0.3
108,293 - 9340 mRNA_972 0.47 0.8
108,297 - 9340 mRNA_972 0.47 -1.2
108,298 - 9340 mRNA_972 0.47 0.1
108,298 + 9340 mRNA_972 0.47 -0.7
108,298 + 9340 mRNA_972 0.47 -0.3
108,304 - 9340 mRNA_972 0.48 0.5
108,314 - 9340 mRNA_972 0.49 -0.3
108,328 + 9340 mRNA_972 0.50 0.8
108,338 + 9340 mRNA_972 0.51 -0.3
108,357 + 9340 mRNA_972 0.53 0.3
108,378 + 9340 mRNA_972 0.56 -0.1
108,378 - 9340 mRNA_972 0.56 0.1
108,390 + 9340 mRNA_972 0.57 -0.4
108,398 - 9340 mRNA_972 0.58 0.2
108,399 - 9340 mRNA_972 0.58 0.5
108,400 - 9340 mRNA_972 0.58 0.5
108,409 + 9340 mRNA_972 0.59 0.4