Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_951

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_950: 9318 - Hypothetical Protein, at 46919 to 47823 9318 mRNA_951: 9319 - K16261 YAT yeast amino acid transporter, at 47917 to 50163 9319 mRNA_952: 9320 - Hypothetical Protein, at 50428 to 51116 9320

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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46,985 - 0.6
47,127 + 9318 mRNA_950 0.23 0.7
47,135 - 9318 mRNA_950 0.24 0.2
47,136 - 9318 mRNA_950 0.24 0.9
47,137 - 9318 mRNA_950 0.24 0.0
47,142 - 9318 mRNA_950 0.25 0.5
47,145 + 9318 mRNA_950 0.25 0.1
47,147 - 9318 mRNA_950 0.25 -0.6
47,150 + 9318 mRNA_950 0.26 0.2
47,150 + 9318 mRNA_950 0.26 0.9
47,159 + 9318 mRNA_950 0.27 1.1
47,160 + 9318 mRNA_950 0.27 -1.2
47,165 + 9318 mRNA_950 0.27 0.3
47,166 + 9318 mRNA_950 0.27 0.6
47,166 + 9318 mRNA_950 0.27 1.7
47,201 - 9318 mRNA_950 0.31 1.0
47,204 + 9318 mRNA_950 0.31 0.4
47,206 + 9318 mRNA_950 0.32 0.0
47,207 + 9318 mRNA_950 0.32 0.1
47,207 - 9318 mRNA_950 0.32 0.1
47,210 + 9318 mRNA_950 0.32 0.3
47,212 - 9318 mRNA_950 0.32 0.3
47,217 - 9318 mRNA_950 0.33 -0.3
47,223 + 9318 mRNA_950 0.34 0.8
47,227 - 9318 mRNA_950 0.34 1.6
47,229 + 9318 mRNA_950 0.34 0.1
47,230 - 9318 mRNA_950 0.34 0.4
47,250 + 9318 mRNA_950 0.37 1.4
47,329 + 9318 mRNA_950 0.45 0.9
47,340 + 9318 mRNA_950 0.47 1.0
47,351 + 9318 mRNA_950 0.48 0.3
47,353 + 9318 mRNA_950 0.48 0.4
47,354 + 9318 mRNA_950 0.48 -0.1
47,393 + 9318 mRNA_950 0.52 1.3
47,395 + 9318 mRNA_950 0.53 0.4
47,404 - 9318 mRNA_950 0.54 -0.2
47,410 + 9318 mRNA_950 0.54 -0.9
47,414 + 9318 mRNA_950 0.55 0.2
47,420 + 9318 mRNA_950 0.55 0.3
47,504 - 9318 mRNA_950 0.65 0.3
47,521 + 9318 mRNA_950 0.67 0.5
47,525 + 9318 mRNA_950 0.67 -0.0
47,530 - 9318 mRNA_950 0.68 -0.8
47,539 + 9318 mRNA_950 0.69 0.2
47,549 - 9318 mRNA_950 0.70 0.8
47,552 + 9318 mRNA_950 0.70 -1.1
47,577 + 9318 mRNA_950 0.73 0.6
47,577 + 9318 mRNA_950 0.73 0.1
47,622 + 9318 mRNA_950 0.78 -0.2
47,705 - 9318 mRNA_950 0.87 -1.1
47,729 - 9318 mRNA_950 0.90 -1.0
47,750 + -1.2
47,755 - -1.0
47,846 - 0.6
47,998 - -2.1
48,155 - 9319 mRNA_951 0.11 -0.6
48,443 - 9319 mRNA_951 0.23 0.2
48,457 - 9319 mRNA_951 0.24 0.1
48,495 - 9319 mRNA_951 0.26 0.0
48,518 + 9319 mRNA_951 0.27 1.8
48,587 - 9319 mRNA_951 0.30 -1.0
49,335 + 9319 mRNA_951 0.63 -0.5
49,418 - 9319 mRNA_951 0.67 1.2
49,730 + 9319 mRNA_951 0.81 -0.0
50,228 + 0.5
50,326 + 0.7
50,387 + 1.0
50,449 - 0.9
50,739 - 9320 mRNA_952 0.45 -0.8
50,784 + 9320 mRNA_952 0.52 -0.2
50,932 - 9320 mRNA_952 0.73 -0.2
51,072 + 0.6