Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_803

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_802: 9170 - SUPERFAMILY--SSF52047, at 1907312 to 1908570 9170 mRNA_803: 9171 - HMMPfam-Velvet factor-PF11754, at 1908961 to 1910410 9171

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,908,217 - 9170 mRNA_802 0.72 0.5
1,909,528 - 9171 mRNA_803 0.39 1.0
1,910,160 + 9171 mRNA_803 0.83 0.0
1,910,609 - -1.2
1,910,742 - -0.2
1,910,746 - 1.3
1,910,747 - 0.3
1,910,750 + 0.6
1,910,763 - 0.0
1,910,766 - 0.5
1,910,767 - -0.5
1,910,882 - -0.2
1,910,901 - 1.1
1,910,913 + 0.3
1,910,918 + 0.4
1,910,928 - 0.3
1,910,932 + 1.5
1,910,932 + 0.9
1,910,938 + 0.7
1,910,942 + 0.3
1,910,988 + -0.5
1,911,044 - 0.1
1,911,049 - 0.2
1,911,058 + 0.7
1,911,066 + 0.0
1,911,066 + 0.3
1,911,070 + 0.5
1,911,085 + 0.8
1,911,089 + 0.5
1,911,095 + -0.1
1,911,195 - 0.5
1,911,208 - -0.0
1,911,215 + 1.2
1,911,219 - -0.3
1,911,363 - 1.6
1,911,364 + 0.4
1,911,368 - 0.1
1,911,372 - 2.2
1,911,375 + 0.5
1,911,375 + 0.3
1,911,378 - 1.5
1,911,380 - 0.9
1,911,381 + 0.3
1,911,382 - -1.1
1,911,383 + 0.9
1,911,383 + 1.5
1,911,383 - 0.3
1,911,386 + 0.6
1,911,387 - 2.0
1,911,395 - 0.6
1,911,398 + 0.1
1,911,398 + -0.1
1,911,399 + 0.9