Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_751

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_750: 9118 - K12840 RBM17, SPF45 splicing factor 45, at 1790653 to 1793277 9118 mRNA_751: 9119 - K19476 IST1 vacuolar protein sorting-associated protein IST1, at 1793395 to 1794980 9119 mRNA_752: 9120 - K12822 RBM25, S164 RNA-binding protein 25, at 1795161 to 1797625 9120

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,792,440 + 9118 mRNA_750 0.68 0.5
1,793,006 + 9118 mRNA_750 0.90 0.6
1,793,299 - 0.1
1,793,338 + 1.1
1,793,460 - -0.5
1,793,462 - -0.6
1,793,475 - -0.2
1,793,564 - 9119 mRNA_751 0.11 1.8
1,793,602 + 9119 mRNA_751 0.13 0.1
1,793,614 + 9119 mRNA_751 0.14 -0.6
1,793,629 + 9119 mRNA_751 0.15 1.8
1,793,771 + 9119 mRNA_751 0.24 0.6
1,794,031 + 9119 mRNA_751 0.40 -0.2
1,794,054 - 9119 mRNA_751 0.42 1.8
1,794,202 + 9119 mRNA_751 0.51 -1.5
1,794,214 + 9119 mRNA_751 0.52 0.5
1,794,355 - 9119 mRNA_751 0.61 1.1
1,794,612 - 9119 mRNA_751 0.77 0.4
1,794,628 - 9119 mRNA_751 0.78 0.9
1,794,639 - 9119 mRNA_751 0.78 0.7
1,794,916 + 0.3
1,795,121 + -0.2
1,795,390 - 0.0
1,795,980 - 9120 mRNA_752 0.33 0.3