Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_655

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_654: 9022 - K14809 DDX55, SPB4 ATP-dependent RNA helicase DDX55/SPB4, at 1573300 to 1575930 9022 mRNA_655: 9023 - K11246 SHO1 SHO1 osmosensor, at 1576214 to 1578020 9023

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
1,575,757 - -0.1
1,576,065 - 0.3
1,576,074 + -0.8
1,576,082 - 1.2
1,576,096 - 0.7
1,576,101 - -0.0
1,576,103 + 0.5
1,576,108 - 0.5
1,576,125 - 0.0
1,576,126 + -0.5
1,576,127 - 0.3
1,576,137 - -0.1
1,576,138 + 1.0
1,576,142 - 1.5
1,576,143 + -0.1
1,576,144 - -0.6
1,576,145 - 0.2
1,576,150 + 0.2
1,576,154 - 1.1
1,576,160 - 0.3
1,576,160 + -0.9
1,576,160 - 0.1
1,576,173 - 0.6
1,576,174 + 0.2
1,576,181 - 0.3
1,576,181 + -0.5
1,576,188 - 0.9
1,576,189 - -0.2
1,576,195 + -0.4
1,576,195 + -0.0
1,576,195 + 0.3
1,576,199 + 1.8
1,576,199 + 0.4
1,576,248 - -0.0
1,576,250 - -0.9
1,576,253 - 0.2
1,576,254 + 0.7
1,576,260 + 0.8
1,576,260 + 1.5
1,576,268 - 0.4
1,576,274 - 0.7
1,576,277 + 0.8
1,576,281 + 1.1
1,576,291 + -0.2
1,576,291 - 0.6
1,576,400 - 9023 mRNA_655 0.10 0.6
1,576,431 - 9023 mRNA_655 0.12 0.2
1,576,563 + 9023 mRNA_655 0.19 0.8
1,576,685 - 9023 mRNA_655 0.26 -0.6
1,576,697 + 9023 mRNA_655 0.27 1.0
1,576,816 + 9023 mRNA_655 0.33 0.4
1,576,871 + 9023 mRNA_655 0.36 -0.9
1,577,660 - 9023 mRNA_655 0.80 -1.9
1,577,713 + 9023 mRNA_655 0.83 -1.1
1,577,714 - 9023 mRNA_655 0.83 -1.5
1,577,865 - -0.9
1,577,889 + 1.4
1,578,130 - -0.9
1,578,170 + -0.4
1,578,309 - -0.2
1,578,319 + -0.4
1,578,554 + 0.4