Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_645

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_644: 9012 - KOG3020 TatD-related DNase, at 1548576 to 1549928 9012 mRNA_645: 9013 - KOG3104 Mod5 protein sorting/negative effector of RNA Pol III synthesis, at 1550382 to 1551455 9013

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,549,916 - 0.9
1,549,934 + 0.6
1,549,984 + -0.3
1,550,978 + 9013 mRNA_645 0.55 0.9
1,551,387 - 0.1
1,551,531 + 0.2
1,551,697 - 1.1
1,551,704 - 2.0
1,551,830 + 0.8
1,551,834 + 1.3
1,551,866 + 0.1
1,551,875 - 0.8
1,551,990 - 0.0
1,551,995 - 0.4
1,552,005 - -0.4
1,552,012 + 0.6
1,552,017 - 0.2
1,552,136 - -0.7
1,552,141 + 1.3
1,552,146 - -0.4
1,552,150 - 0.4
1,552,158 - 1.6
1,552,175 + 1.2
1,552,175 - 0.6
1,552,175 - -0.1
1,552,183 + 1.6
1,552,315 + -0.1
1,552,451 - -0.3