Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_562

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_561: 8929 - Hypothetical Protein, at 1341305 to 1346099 8929 mRNA_562: 8930 - HMMPfam-HPC2 and ubinuclein domain-PF08729, at 1346639 to 1349486 8930 mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1349685 to 1350957 8931

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,345,691 + 0.8
1,345,703 - -0.4
1,346,132 + 0.4
1,346,132 + -0.1
1,346,150 + 0.3
1,346,179 - -0.2
1,346,257 - -0.3
1,346,270 + 0.8
1,346,409 + 0.4
1,346,434 + -0.1
1,346,566 - 0.6
1,346,577 - 0.6
1,346,583 - -0.5
1,346,586 + 0.8
1,346,603 + -1.3
1,349,065 - 8930 mRNA_562 0.85 -0.5
1,349,337 - -0.2
1,349,618 - -0.3
1,349,623 - 0.2
1,349,628 - 0.9
1,349,642 - 1.3
1,349,658 + 0.6
1,350,225 - 8931 mRNA_563 0.42 0.0