Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_505

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_504: 8872 - Hypothetical Protein, at 1199527 to 1200402 8872 mRNA_505: 8873 - HMMPfam-ubiE/COQ5 methyltransferase family-PF01209,SUPERFAMILY--SSF53335, at 1200752 to 1201768 8873

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,199,833 - 8872 mRNA_504 0.35 -1.3
1,199,868 + 8872 mRNA_504 0.39 0.7
1,199,895 - 8872 mRNA_504 0.42 -0.5
1,200,049 + 8872 mRNA_504 0.60 0.3
1,200,161 + 8872 mRNA_504 0.72 0.2
1,200,166 - 8872 mRNA_504 0.73 -0.8
1,200,215 - 8872 mRNA_504 0.79 0.2
1,200,330 + 0.5
1,200,630 + 0.2
1,200,777 - -0.3
1,200,781 - 0.3
1,200,905 + 8873 mRNA_505 0.15 1.0
1,201,078 + 8873 mRNA_505 0.32 -0.1
1,201,200 + 8873 mRNA_505 0.44 0.1
1,201,210 - 8873 mRNA_505 0.45 0.5
1,201,377 - 8873 mRNA_505 0.61 -1.9
1,201,383 + 8873 mRNA_505 0.62 -0.4
1,201,619 - 8873 mRNA_505 0.85 0.9
1,201,637 - 8873 mRNA_505 0.87 0.8
1,201,649 + 8873 mRNA_505 0.88 0.5
1,201,788 + -0.1
1,201,795 - -0.2
1,201,801 - -0.1
1,201,806 + 0.8
1,201,811 + 0.4
1,201,826 + -0.5
1,201,828 + -0.3
1,201,829 - 0.5
1,201,839 - 0.1
1,201,870 + -0.3
1,201,900 - 0.5
1,201,917 - 0.7
1,201,941 - 0.0
1,201,945 + -0.7
1,201,949 + 0.1
1,201,968 + -0.3
1,201,971 - 0.2
1,201,974 + 1.1
1,201,978 + 0.6
1,201,979 - 0.1
1,201,991 - -0.9
1,202,090 + 1.2
1,202,093 - 0.5
1,202,100 - 1.2
1,202,263 - 0.3
1,202,271 - 0.1
1,202,367 + 1.4
1,202,550 + 0.3
1,202,564 + 0.2
1,202,682 - 0.0
1,202,705 + 0.6
1,202,713 + 0.4
1,202,718 + -1.0