Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_468

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_467: 8835 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 1084850 to 1086342 8835 mRNA_468: 8836 - Hypothetical Protein, at 1086424 to 1087519 8836 mRNA_469: 8837 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1088366 to 1093699 8837

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,086,494 - 1.2
1,086,650 + 8836 mRNA_468 0.21 -0.2
1,086,657 - 8836 mRNA_468 0.21 0.4
1,086,807 + 8836 mRNA_468 0.35 1.5
1,086,901 - 8836 mRNA_468 0.44 -0.2
1,087,041 - 8836 mRNA_468 0.56 1.2
1,087,088 - 8836 mRNA_468 0.61 0.0
1,087,216 + 8836 mRNA_468 0.72 0.5
1,087,941 - 0.0
1,087,973 - -0.5
1,087,993 - 0.8
1,088,001 - 0.2
1,088,093 - -0.3
1,088,095 + 0.9
1,088,144 + 0.3
1,088,375 + -0.0
1,088,474 - 0.5