Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_460

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_459: 8827 - K10598 PPIL2, CYC4, CHP60 peptidyl-prolyl cis-trans isomerase-like 2, at 1068531 to 1071036 8827 mRNA_460: 8828 - K15177 LEO1 RNA polymerase-associated protein LEO1, at 1071299 to 1073173 8828 mRNA_461: 8829 - Hypothetical Protein, at 1073341 to 1074099 8829

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,070,359 - 8827 mRNA_459 0.73 0.6
1,070,657 - 8827 mRNA_459 0.85 -0.1
1,070,762 - 8827 mRNA_459 0.89 0.3
1,070,799 + -0.3
1,071,079 - 0.3
1,071,089 - 1.7
1,071,251 + -0.1
1,071,263 - -0.4
1,071,402 - 0.4
1,071,655 - 8828 mRNA_460 0.19 0.6
1,071,659 - 8828 mRNA_460 0.19 1.7
1,071,667 + 8828 mRNA_460 0.20 0.1
1,072,860 + 8828 mRNA_460 0.83 0.8
1,072,975 + 8828 mRNA_460 0.89 1.9
1,073,572 - 8829 mRNA_461 0.30 -0.0
1,073,702 + 8829 mRNA_461 0.48 0.4
1,073,881 - 8829 mRNA_461 0.71 -0.5
1,074,131 + -0.2
1,074,134 - 1.3
1,074,145 - 2.0
1,074,146 + -0.3