Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_416

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_415: 8783 - K03511 POLK DNA polymerase kappa, at 969041 to 971775 8783 mRNA_416: 8784 - Hypothetical Protein, at 972046 to 973465 8784 mRNA_417: 8785 - KOG4697 Integral membrane protein involved in transport between the late Golgi and endosome, at 973590 to 974560 8785

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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971,085 - 8783 mRNA_415 0.75 0.1
971,231 + 8783 mRNA_415 0.80 -0.7
971,406 + 8783 mRNA_415 0.86 0.6
971,520 - 0.5
971,676 - -0.1
971,794 + -0.2
971,807 - 0.3
971,959 - -0.3
971,972 - -0.6
971,990 - -0.5
972,009 + -0.3
972,230 + 8784 mRNA_416 0.13 0.4
972,248 - 8784 mRNA_416 0.14 -0.2
972,292 + 8784 mRNA_416 0.17 0.5
972,396 - 8784 mRNA_416 0.25 -0.7
972,397 + 8784 mRNA_416 0.25 0.9
972,818 + 8784 mRNA_416 0.54 -0.4
972,854 + 8784 mRNA_416 0.57 0.4
973,013 + 8784 mRNA_416 0.68 0.6
973,096 - 8784 mRNA_416 0.74 -0.1
973,264 + 8784 mRNA_416 0.86 0.2
973,447 - 0.5
973,484 - 0.2
973,582 - 1.7
973,583 - 0.9
973,704 - 8785 mRNA_417 0.12 0.6
973,721 + 8785 mRNA_417 0.13 0.2
973,722 - 8785 mRNA_417 0.14 0.8