Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_359

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_358: 8726 - KOG1515 Arylacetamide deacetylase, at 836164 to 837965 8726 mRNA_359: 8727 - BLAST minor histocompatibility antigen H13 [Kwoniella d..., at 838218 to 839816 8727 mRNA_360: 8728 - BLAST CBN-SNA-1 protein [Caenorhabditis brenneri], at 840166 to 840441 8728 mRNA_361: 8729 - Hypothetical Protein, at 840466 to 840977 8729

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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837,317 + 8726 mRNA_358 0.64 -0.1
837,599 - 8726 mRNA_358 0.80 0.9
837,609 + 8726 mRNA_358 0.80 -0.1
837,899 - 0.1
838,049 - -0.3
838,075 + 0.4
838,186 - 0.4
838,231 + 0.7
838,327 + 0.3
838,338 + 0.2
838,341 - 0.4
838,349 + 1.6
838,633 - 8727 mRNA_359 0.26 0.0
838,666 - 8727 mRNA_359 0.28 -0.0
838,752 - 8727 mRNA_359 0.33 1.2
838,926 - 8727 mRNA_359 0.44 -1.0
839,100 - 8727 mRNA_359 0.55 -1.0
839,917 - 0.8
839,987 - 0.6
840,229 + 8728 mRNA_360 0.23 0.1
840,467 - 0.5
840,513 - 0.1
840,516 + 0.8