Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_320

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_319: 8687 - KOG2134 Polynucleotide kinase 3' phosphatase, at 759335 to 760537 8687 mRNA_320: 8688 - Hypothetical Protein, at 760656 to 762781 8688 mRNA_321: 8689 - KOG4317 Predicted Zn-finger protein, at 762839 to 764616 8689

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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759,880 - 8687 mRNA_319 0.45 1.2
760,182 - 8687 mRNA_319 0.70 1.7
760,325 - 8687 mRNA_319 0.82 -0.3
760,329 - 8687 mRNA_319 0.83 -0.6
760,350 + 8687 mRNA_319 0.84 0.0
760,450 + 0.3
760,611 - 0.6
760,639 - 0.4
760,752 - -0.3
760,753 - -0.4
760,753 + -0.0
760,753 - 0.0
760,755 + -0.6
760,756 + 1.2
761,027 - 8688 mRNA_320 0.17 0.6
761,046 + 8688 mRNA_320 0.18 1.4
761,680 - 8688 mRNA_320 0.48 0.9
761,802 - 8688 mRNA_320 0.54 -1.5
761,914 + 8688 mRNA_320 0.59 -0.1
762,182 - 8688 mRNA_320 0.72 0.2
762,477 - 8688 mRNA_320 0.86 1.1
762,501 + 8688 mRNA_320 0.87 -1.3
762,645 + -0.4
762,785 - -1.0
762,794 + 0.2