Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_317

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_316: 8684 - K18802 DUG3 glutamine amidotransferase, at 754275 to 756026 8684 mRNA_317: 8685 - HMMPfam-DnaJ domain-PF00226,PRINTS-DnaJ domain signature-PR00625,ProSitePatterns-Nt-dnaJ domain signature.-PS00636,ProSiteProfiles-dnaJ domain profile.-PS50076,ProSiteProfiles-IQ motif profile.-PS50096,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565, at 756228 to 757512 8685 mRNA_318: 8686 - Interpro Fungal domain of unknown function (DUF1750), at 757594 to 759249 8686

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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755,263 - 8684 mRNA_316 0.56 0.4
755,323 + 8684 mRNA_316 0.60 0.3
756,084 - 1.2
756,241 - -0.4
756,254 - 0.3
756,409 - 8685 mRNA_317 0.14 -0.0
756,641 - 8685 mRNA_317 0.32 0.4
756,817 + 8685 mRNA_317 0.46 -0.6
756,974 - 8685 mRNA_317 0.58 0.5
757,021 + 8685 mRNA_317 0.62 0.8
757,165 - 8685 mRNA_317 0.73 0.9
757,425 + -0.3